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Publications - C. Cremer*

(last update April 2016)

*The list of publications gives a selection covering the fields of interest in Applied Optics, Digital Image Analysis, Bioinformatics, Biophysics and Biophotonics, Biomolecular Labelling Techniques, and applications in Molecular Cytogenetics and Nuclear Genome Structure Research.

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2016 Żurek-Biesiada D, Szczurek AT., Prakash K, Best G, Mohana GK., Lee HK, Roignant JY, Dobrucki JW., Cremer C, Birk U. Quantitative super-resolution localization microscopy of DNA in situ using Vybrant® DyeCycle™ Violet fluorescent probe

 Data in Brief, volume 7,


2016 Pierzyńska-Mach A, Szczurek A, Zanacchi FC, Pennacchiettic F, Drukała J, Diaspro A, Cremer C, Darzynkiewicz Z, Dobrucki JW. Subnuclear localization, rates and effectiveness of UVC-induced unscheduled DNA synthesis visualized by fluorescence widefield, confocal and super-resolution

 Cell Cycle (accepted), volume 0,

2016 Moser F, Hildenbrand G, Müller P, Al Saroori A, Biswas A, Bach M, Wenz F, Cremer C, Burger N, Veldwijk MR., Hausmann M Cellular Uptake of Gold Nanoparticles and Their Behavior as Labels for Localization Microscopy

Biophysical journal, volume 110


2016 Cremer C, Birk U. Perspectives in Super-resolved Fluorescence Microscopy: What comes next?

Frontiers in Physics, volume 4

2015 Hausmann M, Cremer C, Friedl A, Dollinger Günther, Löbrich M, Friedland W. 3D/4D Architektur von chromosomalen Bruchpunktregionen im Zellkern nach Bestrahlung von Normalzellen und Tumorzellen-Vorhaben 3610S30015

Technical report BfS-RESFOR-100/15, Bundesamt für Strahlenschutz (BfS), .

2015 Oleksiuk O, Abba M, Tezcan KC, Schaufler W, Bestvater F, Patil N, Birk U, Hafner M, Altevogt P, Cremer C, Allgayer H. Single-Molecule Localization Microscopy allows for the analysis of cancer metastasis-specific miRNA distribution on the nanoscale.



2015 Kirmes I, Szczurek A, Prakash K, Charapitsa I, Heiser C, Musheev M, Schock F, Fornalczyk K, Ma D, Birk U, Cremer C, Reid G A transient ischemic environment induces reversible compaction of chromatin

Genome Biology, volume 16,


2015 Żurek-Biesiada D, Szczurek AT., Prakash K, Mohana GK., Lee HK, Roignant JY, Birk U, Dobrucki JW., Cremer C. Localization microscopy of DNA in situ using Vybrant® DyeCycle™ Violet fluorescent probe: A new approach to study nuclear nanostructure at single molecule resolution

Experimental Cell Research 

2015 Grab A.L., Hagmann M., Dahint R., Cremer C. Localization microscopy (SPDM) facilitates high precision control of lithographically produced nanostructures

Micron, volume 68,  

2015 Stuhlmüller M., Schwarz-Finsterle J., Fey E., Lux J., Bach M., Cremer C., Hinderhofer K., Hausmann M., Hildenbrand G. In situ optical sequencing and structure analysis of a trinucleotide repeat genome region by localization microscopy after specific COMBO-FISH nano-probing

Nanoscale, volume 7, .


2015 Prakash K, Fournier D, Redl S, Best G, Borsos Máté, Tiwari VK., Tachibana-Konwalski Kë, Ketting Ré F., Parekh SH., Cremer C, others Superresolution imaging reveals structurally distinct periodic patterns of chromatin along pachytene chromosomes

Proceedings of the National Academy of Sciences, volume 112,  


2014 Qiaoyun Wang, Ruediger Dierkes, Rainer Kaufmann, Christoph Cremer Quantitative analysis of individual hepatocyte growth factor receptor clusters in influenza A virus infected human epithelial cells using localization microscopy

Biochimica et Biophysica Acta,


2014 C. Cremer • R. Kaufmann • M. Gunkel • F. Polanski • P. Müller • R. Dierkes • S. Degenhard • C. Wege • M. Hausmann • U. Birk Application perspectives of localization microscopy in virology

Histochem Cell Biol

DOI 10.1007/s00418-014-1203-4


2014 P. Müller • N.  A. Lemmermann • R. Kaufmann • M. Gunkel • D. Paech • G. Hildenbrand • R. Holtappels • C. Cremer • M. Hausmann Spatial distribution and structural arrangement of a murine cytomegalovirus glycoprotein detected by SPDM localization microscopy

Histochem Cell Biol,

DOI 10.1007/s00418-014-1185-2


2014 Thomas Cremer · Christoph Cremer · Peter Lichter Recollections of a scientific journey published in human genetics: from chromosome territories to interphase cytogenetics and comparative genome hybridization

Hum Genet (2014) 133:403–416

DOI 10.1007/s00439-014-1425-5


2014 Aleksander T Szczurek, Kirti Prakash, Hyun-Keun Lee, Dominika J Żurek-Biesiada, Gerrit Best, Martin Hagmann, Jurek W Dobrucki, Christoph Cremer and Udo Birk Single molecule localization microscopy of the distribution of chromatin using Hoechst and DAPI fluorescent probes

Nucleus 5:4, 331–340,

2014 Christoph Cremer Far-field Light Microscopy

eLS subject area: Cell Biology

 in: eLS. John Wiley & Sons, Ltd: Chichester,

DOI: 10.1002/9780470015902.a0005922.pub2,

2014 A.L. Grab, M. Hagmann, R. Dahint, C. Cremer Localization microscopy (SPDM) facilitates high precision control oflithographically produced nanostructures

Micron 68 (2015) 1–7


2013 Christoph Cremer and Barry R. Masters Resolution enhancement techniques in microscopy

The European Physical Journal H

2013 Sabrina Rossberger, Thomas Ach, Gerrit Best, Christoph Cremer, Rainer Heintzmann, Stefan Dithmar High-resolution imaging of autofluorescent particles within drusen using structured illumination microscopy

Br J Opthalmol 2013, 97, 518-523


2013 Gerrit Best, Roman Amberger, Christoph Cremer Super-Resolution Micrroscopy: Interference and Pattern Techniques

in Fluorescence Microscopy, From principles to Biological Applications, edited by Ulrich Kubitscheck, Wiley-Blackwell, Chapter 9, 345-373

2013 S. Rossberger, G. Best, D. Baddeley, R. Heintzmann, U. Birk, S. Dithmar, C. Cremer Combination of structured illumination and single molecule localization microscopy in one setup

Journal of Optics 15, 094003, doi: 10.1088/2040-8978/15/9/094003


2012 Thomas Ach, Gerrit Best, Sabrina Rossberger, Rainer Heintzmann, Christoph Cremer, Stefan Dithmar Autofluorescence imaging of human RPE cell granules using structured illumination microscopy

British Journal of Opthalmology, BJO Online First, published on July 3, 2012 as 0.1136/bjophthalmol-2012-301547

2012 C. Cremer Optics far Beyond the Diffraction Limit

in Springer Handbook of Lasers and Optics, Editor Prof. Dr. Frank Träger, ISBN: 978-3-642-19408-5 e-ISBN: 978-3-642-19409-2, DOI 10.1007/978-3-642-19409-2, Springer Dordrecht Heidelberg London New York Library of Congress Control Number: 2012933971, 1359-1397

2012 Rainer Kaufmann, Jörg Piontek, Frederik Grüll, Manfred Kirchgessner, Jan Rossa, Hartwig Wolburg, Ingolf E. Blasig, Christoph Cremer Visualization and Quantitative Analysis of Reconstituted Tight Junctions Using Localization Microscopy

PLoS ONE,, Volume 7, Issue 2, e31128

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